Publication
  • 2023
  • 2022
  • 2021
  • 2020
  • 2019
  • 2018
  • 2011-2017
  • 1. Zhang, Q., B. Yao, X. Long, Z. Chen, M. He, Y. Wu, N. Qiao, Z. Ma, Z. Ye, Y. Zhang, S. Yao, Y. Wang, H. Cheng, H. Chen, H. Ye, Y. Wang, Y. Li, J. Chen, Z. Zhang*, F. Guo* and Y. Zhao* (2023).” Single-cell sequencing identifies differentiation-related markers for molecular classification and recurrence prediction of PitNET.” Cell Rep Med 4(2): 100934.
  • 2. Yan, R., X. Cheng, C. Gu, Y. Xu, X. Long, J. Zhai, F. Sun, J. Qian, Y. Du, H. Wang* and F. Guo* (2023). “Dynamics of DNA hydroxymethylation and methylation during mouse embryonic and germline development.” Nat Genet 55(1): 130-143.
  • 3. Zhai, J., Y. Xu, H. Wan, R. Yan, J. Guo, R. Skory, L. Yan, X. Wu, F. Sun, G. Chen, W. Zhao, K. Yu, W. Li*, F. Guo*, N. Plachta* and H. Wang* (2023). “Neurulation of the cynomolgus monkey embryo achieved from 3D blastocyst culture.” Cell 186 (10): 2078-2091.
  • 4. Wu, X., W. Zhao, H. Wu, Q. Zhang, Y. Wang, K. Yu, J. Zhai, F. Mo, M. Wang, S. Li, X. Zhu, X. Liang, B. Hu, G. H. Liu, J. Wu, H. Wang, F. Guo* and L. Yu* (2023). "An aggregation of human embryonic and trophoblast stem cells reveals the role of trophectoderm on epiblast differentiation." Cell Prolif: e13492.
  •  
  • 1. Chen, M., X. Long, M. Chen, F. Hao, J. Kang, N. Wang, Y. Wang, M. Wang, Y. Gao, M. Zhou, L. Duo, X. Zhe, J. He, B. Ren, Y. Zhang, B. Liu, J. Li, Q. Zhang, L. Yan, X. Cui, Y. Wang, Y. Gui, H. Wang, L. Zhu*, D. Liu*, F. Guo* and F. Gao* (2022). "Integration of single-cell transcriptome and chromatin accessibility of early gonads development among goats, pigs, macaques, and humans." Cell Rep 41(5): 111587.
  • 2. Long, X., Q. Yang, J. Qian, H. Yao, R. Yan, X. Cheng, Q. Zhang, C. Gu, F. Gao, H. Wang, L. Zhang* and F. Guo* (2022). "Obesity modulates cell-cell interactions during ovarian folliculogenesis." iScience 25(1): 103627.
  • 3. Qian, J*. and F. Guo* (2022). "De novo programming: establishment of epigenome in mammalian oocytes." Biol Reprod 107(1): 40-53.
  • 4. Qian, J., R. Zhu, R. Yan, X. Long and F. Guo* (2022). "Isolation of mouse ovarian follicles for single-cell RNA-seq and in vitro culture." STAR Protoc 3(3): 101537.
  • 5. Bao, W., H. Xing, S. Cao, X. Long, H. Liu, J. Ma, F. Guo, Z. Deng and X. Liu (2022). "Neutrophils restrain sepsis associated coagulopathy via extracellular vesicles carrying superoxide dismutase 2 in a murine model of lipopolysaccharide induced sepsis." Nat Commun 13(1): 4583.
  • 6. Yang, Z., X. Xu, C. Gu, A. V. Nielsen, G. Chen, F. Guo*, C. Tang* and Y. Zhao* (2022). "Chemical Pretreatment Activated a Plastic State Amenable to Direct Lineage Reprogramming." Front Cell Dev Biol 10: 865038.
  • 7. Zhai, J., J. Guo, H. Wan, L. Qi, L. Liu, Z. Xiao, L. Yan, D. A. Schmitz, Y. Xu, D. Yu, X. Wu, W. Zhao, K. Yu, X. Jiang*, F. Guo*, J. Wu* and H. Wang* (2022). "Primate gastrulation and early organogenesis at single-cell resolution." Nature 612(7941): 732-738.
  • 1. Yan, R., C. Gu*, D. You, Z. Huang, J. Qian, Q. Yang, X. Cheng, L. Zhang, H. Wang, P. Wang* and F. Guo* (2021). "Decoding dynamic epigenetic landscapes in human oocytes using single-cell multi-omics sequencing." Cell Stem Cell 28(9): 1641-1656 e1647.
  • 2. Yan, R., X. Cheng and F. Guo* (2021). "Protocol for scChaRM-seq: Simultaneous profiling of gene expression, DNA methylation, and chromatin accessibility in single cells." STAR Protoc 2(4): 100972.
  • 1. Shen, H., C. Gu, T. Liang, H. Liu, F. Guo* and X. Liu* (2020). "Unveiling the heterogeneity of NKT cells in the liver through single cell RNA sequencing." Sci Rep 10(1): 19453.
  • 2. Yang, Z., X. Xu, C. Gu, J. Li, Q. Wu, C. Ye, A. V. Nielsen, L. Mao, J. Ye, K. Bai, F. Guo*, C. Tang* and Y. Zhao* (2020). "Chemicals orchestrate reprogramming with hierarchical activation of master transcription factors primed by endogenous Sox17 activation." Commun Biol 3(1): 629.
  • 1. Gu, C., S. Liu, Q. Wu, L. Zhang and F. Guo* (2019). "Integrative single-cell analysis of transcriptome, DNA methylome and chromatin accessibility in mouse oocytes." Cell Res 29(2): 110-123.
  • 2. Zhou, C., Y. Sun, R. Yan, Y. Liu, E. Zuo, C. Gu, L. Han, Y. Wei, X. Hu, R. Zeng, Y. Li*, H. Zhou*, F. Guo* and H. Yang* (2019). "Off-target RNA mutation induced by DNA base editing and its elimination by mutagenesis." Nature 571(7764): 275-278.
  • 1. Chen, X., J. Zhao, C. Gu, Y. Cui, Y. Dai, G. Song, H. Liu, H. Shen, Y. Liu, Y. Wang, H. Xing, X. Zhu, P. Hao, F. Guo* and X. Liu* (2018). "Med23 serves as a gatekeeper of the myeloid potential of hematopoietic stem cells." Nat Commun 9(1): 3746.
  • 2. Li, L., F. Guo, Y. Gao, Y. Ren, P. Yuan, L. Yan, R. Li, Y. Lian, J. Li, B. Hu, J. Gao, L. Wen, F. Tang* and J. Qiao* (2018). "Single-cell multi-omics sequencing of human early embryos." Nat Cell Biol 20(7): 847-858.
  • 1. Guo, F*., L. Li, J. Li, X. Wu, B. Hu, P. Zhu, L. Wen and F. Tang* (2017). "Single-cell multi-omics sequencing of mouse early embryos and embryonic stem cells." Cell Res 27(8): 967-988.
  • 2. Guo, H., B. Hu, L. Yan, J. Yong, Y. Wu, Y. Gao, F. Guo, Y. Hou, X. Fan, J. Dong, X. Wang, X. Zhu, J. Yan, Y. Wei, H. Jin, W. Zhang, L. Wen, F. Tang and J. Qiao (2017). "DNA methylation and chromatin accessibility profiling of mouse and human fetal germ cells." Cell Res 27(2): 165-183.
  • 3. Li, L., J. Dong, L. Yan, J. Yong, X. Liu, Y. Hu, X. Fan, X. Wu, H. Guo, X. Wang, X. Zhu, R. Li, J. Yan, Y. Wei, Y. Zhao, W. Wang, Y. Ren, P. Yuan, Z. Yan, B. Hu, F. Guo, L. Wen, F. Tang and J. Qiao (2017). "Single-Cell RNA-Seq Analysis Maps Development of Human Germline Cells and Gonadal Niche Interactions." Cell Stem Cell 20(6): 858-873 e854.
  • 4. Yan, L., H. Guo, B. Hu, R. Li, J. Yong, Y. Zhao, X. Zhi, X. Fan, F. Guo, X. Wang, W. Wang, Y. Wei, Y. Wang, L. Wen, J. Qiao and F. Tang (2016). "Epigenomic Landscape of Human Fetal Brain, Heart, and Liver." J Biol Chem 291(9): 4386-4398.
  • 5. Guo, F., L. Yan, H. Guo, L. Li, B. Hu, Y. Zhao, J. Yong, Y. Hu, X. Wang, Y. Wei, W. Wang, R. Li, J. Yan, X. Zhi, Y. Zhang, H. Jin, W. Zhang, Y. Hou, P. Zhu, J. Li, L. Zhang, S. Liu, Y. Ren, X. Zhu, L. Wen, Y. Q. Gao, F. Tang and J. Qiao (2015). "The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ Cells." Cell 161(6): 1437-1452.
  • 6. Li, Z., T. P. Gu, A. R. Weber, J. Z. Shen, B. Z. Li, Z. G. Xie, R. Yin, F. Guo, X. Liu, F. Tang, H. Wang, P. Schar and G. L. Xu (2015). "Gadd45a promotes DNA demethylation through TDG." Nucleic Acids Res 43(8): 3986-3997.
  • 7. Guo, H., P. Zhu, F. Guo, X. Li, X. Wu, X. Fan, L. Wen and F. Tang (2015). "Profiling DNA methylome landscapes of mammalian cells with single-cell reduced-representation bisulfite sequencing." Nat Protoc 10(5): 645-659.
  • 8. F. Guo., X. Li, D. Liang, T. Li, P. Zhu, H. Guo, X. Wu, L. Wen, T. P. Gu, B. Hu, C. P. Walsh, J. Li, F. Tang and G. L. Xu (2014). "Active and passive demethylation of male and female pronuclear DNA in the mammalian zygote." Cell Stem Cell 15(4): 447-459.
  • 9. Guo, H., P. Zhu, L. Yan, R. Li, B. Hu, Y. Lian, J. Yan, X. Ren, S. Lin, J. Li, X. Jin, X. Shi, P. Liu, X. Wang, W. Wang, Y. Wei, X. Li, F. Guo, X. Wu, X. Fan, J. Yong, L. Wen, S. X. Xie, F. Tang and J. Qiao (2014). "The DNA methylation landscape of human early embryos." Nature 511(7511): 606-610.
  • 10. Hu, X., L. Zhang, S. Q. Mao, Z. Li, J. Chen, R. R. Zhang, H. P. Wu, J. Gao, F. Guo, W. Liu, G. F. Xu, H. Q. Dai, Y. G. Shi, X. Li, B. Hu, F. Tang, D. Pei and G. L. Xu (2014). "Tet and TDG mediate DNA demethylation essential for mesenchymal-to-epithelial transition in somatic cell reprogramming." Cell Stem Cell 14(4): 512-522.
  • 11. Rutledge, C. E., H. T. Lau, H. Mangan, L. L. Hardy, O. Sunnotel, F. Guo, A. M. MacNicol, C. P. Walsh and D. J. Lees-Murdock (2014). "Efficient translation of Dnmt1 requires cytoplasmic polyadenylation and Musashi binding elements." PLoS One 9(2): e88385.
  • 12. Du, Y., B. Liu, F. Guo, G. Xu, Y. Ding, Y. Liu, X. Sun and G. Xu (2012). "The essential role of Mbd5 in the regulation of somatic growth and glucose homeostasis in mice." PLoS One 7(10): e47358.
  • 13. Gu, T. P., F. Guo, H. Yang, H. P. Wu, G. F. Xu, W. Liu, Z. G. Xie, L. Shi, X. He, S. G. Jin, K. Iqbal, Y. G. Shi, Z. Deng, P. E. Szabo, G. P. Pfeifer, J. Li and G. L. Xu (2011). "The role of Tet3 DNA dioxygenase in epigenetic reprogramming by oocytes." Nature 477(7366): 606-610.